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AquaGene

The curated genetic reference database for fish species
Allowing an unambiguous determination of fisheries products
Do an alignment search against your sequence

Species: Squatina oculata

Family: Squatinidae

BOLD data

Samples

Sampling location: RV Dr Fridtjof Nansen
Sampling country: Angola
Sampling latitude: -11.983333333333 °
Sampling longitude: 13.533333333333 °
Sampling date: 05-03-2002
FASTA sequences
>org.aquagene|A172_16S|16S ribosomal RNA|Squatina oculata
CGCCTCTTGATTACTATAAGAGGTCCCGCCTGCCCTGTGACAATGTTTAACGGCCGCGGTATTTTGACCGTGCGAAGGTAGCGTAATCACTTGTCTTTTAAATGAAGACCTGTATGAAAGGCATCACGAGAGTTTAACTGTCTCTATTTTCTAATCAATGAAATTGATTTTCCCGTGAAGAAGCGGGAATAATACCATAAGACGAGAAGACCCTATGGAGCTTCAAACACTTAGATTAATTTTTAAAAATTTTTTTACCCTAAGGGGAAAAATCCACATAATATTTTTAATTTAATTGTTTTTGGTTGGGGTGACCAAGGGGAAAAACAAATCCCCCTTATCGATTGAGTATTAAATACTTAAAAATTAAAGCGACAGCTTTAATTAATAAAACATTTATCGAACAATGACCCAGGATTTACTGATCAATGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTTTCCTAGAGTCCCTATCGCCGAAAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGTAACCGCTATTAAGGGTTCGTTTGTTCAACGATTAATAGTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>org.aquagene|A172_COI|Cytochrome c oxidase subunit I|Squatina oculata
AATAGTAGGTACCGCCCTAAGTTTACTTATCCGAGCAGAATTAAGCCAGCCCGGAACACTCCTTGGGGACGATCAAATTTACAATGTAATCGTTACTGCCCACGCTTTAGTAATAATCTTTTTTATAGTAATACCAATTATGATCGGAGGCTTTGGAAACTGATTAGTCCCCTTAATAATTGGCGCACCAGATATAGCTTTCCCCCGAATAAATAATATAAGTTTCTGACTCTTACCTCCCTCCCTACTTTTACTACTTGCCTCAGCTGGGGTTGAAGCAGGGGCCGGCACTGGCTGAACGGTCTACCCTCCTCTTGCAGGAAATTTAGCTCACGCCGGAGCTTCAGTAGATCTAGCAATTTTTTCCTTACATTTAGCTGGCATCTCTTCAATCTTAGCCTCTATTAATTTTATCACAACCATTATTAATATAAAACCCCCAGCTATTTCCCAATATCAAACACCACTCTTTGNTTGATCGATCCTTGTGACCACTGTCCTTCTCCTCCTCTCTCTTCCAGTCCTCGCAGCCGCAATCACAATATTACTAACCGACCGTAACCTAAACACAACATTTTTTGACCCTGCAGGGGGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>org.aquagene|A172_CYB|Cytochrome-b|Squatina oculata
AATCACAATGACCACCAACATCCGAAAAACTCATCCACTTTTTAAAATTATTAATCACACCCTAATTGATCTACCAACACCCTCCAACATCTCAATCTGATGAAACTTCGGTTCACTCTTAGGACTTTGCCTTATTATCCAAATCCTAACAGGCCTATTTTTAGCCATACATTACACTGCAGATATTTCCCTTGCTTTCTCCTCAGTAACCCATATTTGCCGAGATGTTAATTACGGTTGGCTAATTCGTAATATTCATGCTAACGGAGCATCCATTTTCTTTATTTGTATCTACTTACATATTGCCCGAGGATTATATTACGGATCTTACCTTTCTAAAGAAACATGAAATATTGGAGTAATTTTACTATTTTTACTAATAGCAACAGCCTTCGTGGGTTATGTTTTACCATGAGGACAAATATCTTTCTGAGGCGCCACAGTTATTACTAATCTTCTCTCTGCCCTACCATATGTCGGAAACACACTGGTACAATGAATTTGAGGGGGTTTCTCAATCGACAACGCCACCCTAACACGTTTCTTCGCCTTCCACTTCATTCTCCCCTTCCTAATCCTTGGACTTACCCTAATTCATCTCCTCTTCCTCCATGAGACTGGCTCCAACAACCCCACTGGAATTAATTCTGATATAGATAAAATCCCATTTCACCCCTACTTCTCGTACAAAGATATCCTTGGTTTCTTTGTAATAATCTTACTATTAACCCTTTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>org.aquagene|A172_ND2|NADH dehydrogenase subunit 2|Squatina oculata
TGAATAGGCCTAGAAATTAATACCCTAGCTATTACTCCTCTGATAATTAATCAACATCACCCACGAGCAGTAGAAGCAACCACAAAATATTTCATTACACAGGCAACCGCCTCTGCTTTACTCTTATTTGCCAGCGTAACAAACGCCTGAGCTTCAGGAGAGTGAAGCCTTCTTGAAATAATTAATCCAACATCTGCCACACTTGCAACAATCGCACTAGCCTTAAAAATTGGCCTCGCACCTTTACATTTTTGATTACCCGAAGTCCTTCAAGGACTAAACCTCACCACAGGTTTGATCCTATCAACTTGACAAAAACTCGCTCCATTCGCTATCCTTCTTCAATTATACCCCACACTAAACCCAAATCTACTATTATTTTTAGGCATCACCTCTACTGTCGTGGGTGGTTGAGGGGGACTTAACCAAACTCAACTACGAAAAATTCTAGCTTACTCATCAATTGCTCACCTTGGTTGAATGGTTACAATCCTACATTACTCCCCCAATCTTACTCAACTTAACCTAGCCCTATATATCATTATAACCTTAACAACCTTCCTATTTTTCAAAATATTTAACTCCACAAAAATTAACTCCATTTCTACCTCAACAATTAAATCTCCACTACTATCTGTCATTACCATAATAACCCTACTCTCCCTTGGAGGCCTCCCACCACTAACTGGATTTATGCCAAATGATTAATTCTGCAGAACTTACTAAACAAATCTAAATTCTAGCTACCGTTATAGCTTTTGCAGCCCTTCTTAGCCTA
Images
Image A172-1 of sample A172 (species: Squatina oculata) / © Prof. Dr. Reinhold Hanel
[1]
Details for image 1

© Prof. Dr. Reinhold Hanel

Copyrights:

[1] Prof. Dr. Reinhold Hanel

Sampling location: RV Dr Fridtjof Nansen
Sampling country: Angola
Sampling latitude: -10.8 °
Sampling longitude: 13.333333333333 °
Sampling date: 07-03-2002
FASTA sequences
>org.aquagene|A250_16S|16S ribosomal RNA|Squatina oculata
CGCCTCTTGATTACTATAAGAGGTCCCGCCTGCCCTGTGACAATGTTTAACGGCCGCGGTATTTTGACCGTGCGAAGGTAGCGTAATCACTTGTCTTTTAAATGAAGACCTGTATGAAAGGCATCACGAGAGTTTAACTGTCTCTATTTTCTAATCAATGAAATTGATTTTCCCGTGAAGAAGCGGGAATAATACCATAAGACGAGAAGACCCTATGGAGCTTCAAACACTTAGATTAATTTTTAAAAATTTTTTTACCCTAAGGGGAAAAAATCCACATAATATTTTTAATTTAATTGTTTTTGGTTGGGGTGACCAAGGGGAAAAACAAATCCCCCTTATCGATTGAGTATTAAATACTTAAAAATTAAAGCGACAGCTTTAATTAATAAAACATTTATCGAACAATGACCCAGGATTTACTGATCAATGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTTTCCTAGAGTCCCTATCGCCGAAAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGTAACCGCTATTAAGGGTTCGTTTGTTCAACGATTAATAGTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>org.aquagene|A250_COI|Cytochrome c oxidase subunit I|Squatina oculata
CCTTTACTTAATCTTCGGTGCATGAGCAGGAATAGTAGGTACCGCCCTAAGTTTACTTATCCGAGCAGAATTAAGCCAGCCCGGAACACTCCTTGGGGACGATCAAATTTACAATGTAATCGTTACTGCCCACGCTTTAGTAATAATCTTTTTTATAGTAATACCAATTATGATTGGAGGCTTTGGAAACTGATTAGTCCCCTTAATAATTGGCGCACCAGATATAGCTTTCCCCCGAATAAATAATATAAGTTTCTGACTCTTACCTCCCTCCCTACTTTTACTACTTGCCTCAGCTGGGGTTGAAGCAGGGGCCGGCACTGGCTGAACGGTCTACCCTCCTCTTGCAGGAAATTTAGCTCACGCCGGAGCTTCAGTAGATCTAGCAATTTTTTCCTTACATTTAGCTGGCATCTCTTCAATCTTAGCCTCTATTAATTTTATCACAACCATTATTAATATAAAACCCCCAGCTATTTCCCAATATCAAACACCACTCTTTGTTTGATCAATCCTTGTGACCACTGTCCTTCTCCTCCTCTCTCTTCCAGTCCTCGCAGCCGCAATCACAATATTACTAACCGACCGTAACCTAAACACAACATTTTTTGACCCTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>org.aquagene|A250_COI_2|Cytochrome c oxidase subunit I|Squatina oculata
AAAGACATTGGCACCCTTTACTTAATCTTCGGTGCATGAGCAGGAATAGTAGGTACCGCCCTAAGTTTACTTATCCGAGCAGAATTAAGCCAGCCCGGAACACTCCTTGGGGACGATCAAATTTACAATGTAATCGTTACTGCCCACGCTTTAGTAATAATCTTTTTTATAGTAATACCAATTATGATTGGAGGCTTTGGAAACTGATTAGTCCCCTTAATAATTGGCGCACCAGATATAGCTTTCCCCCGAATAAATAATATAAGTTTCTGACTCTTACCTCCCTCCCTACTTTTACTACTTGCCTCAGCTGGGGTTGAAGCAGGGGCCGGCACTGGCTGAACGGTCTACCCTCCTCTTGCAGGAAATTTAGCTCACGCCGGAGCTTCAGTAGATCTAGCAATTTTTTCCTTACATTTAGCTGGCATCTCTTCAATCTTAGCCTCTATTAATTTTATCACAACCATTATTAATATAAAACCCCCAGCTATTTCCCAATATCAAACACCACTCTTTGTTTGATCAATCCTTGTGACCACTGTCCTTCTCCTCCTCTCTCTTCCAGTCCTCGCAGCCGCAATCACAATATTACTAACCGAC
>org.aquagene|A250_ND2|NADH dehydrogenase subunit 2|Squatina oculata
ACCACAGGTTTGATCCTATCAACTTGACAAAAACTCGCTCCATTCGCTATCCTTCTTCAATTATACCCCACACTAAACCCAAATCTACTATTATTTTTAGGCATCACCTCTACTGTCGTGGGTGGTTGAGGGGGACTTAACCAAACTCAACTACGAAAAATTCTAGCTTACTCATCAATTGCTCACCTTGGTTGAATGGTTACAATCCTACATTACTCCCCCAATCTTACTCAACTTAACCTAGCCCTATATATCATTATAACCTTAACAACCTTCCTATTTTTCAAAATATTTAACTCCACAAAAATTAACTCCATTTCTACCTCAACAATTAAATCTCCACTACTATCTGTCATTACCATAATAACCCTACTCTCCCTTGGAGGCCTCCCACCACTAACTGGATTTATGCCAAATGATTAATTCTGCAGACTTACTAACAAAATCTAATGTCTATGCTACCGTTATAGCTTTGCAGCCCTTCTTAGCCTA
Images
Image A250-1 of sample A250 (species: Squatina oculata) / © Prof. Dr. Reinhold Hanel
[1]
Details for image 1

© Prof. Dr. Reinhold Hanel

Copyrights:

[1] Prof. Dr. Reinhold Hanel

Sampling location: RV Dr Fridtjof Nansen, Angola Basin and Continental shelf offshore Angola: 10° 6' S / 13° 0'E ; station: 3069; 104 - 102 m; 05:55:00 - 06:25:00 am
Sampling country: Angola
Sampling latitude: -10.1 °
Sampling longitude: 13 °
Sampling date: 15-03-2003
Voucher: 30975
FASTA sequences
>org.aquagene|B218_16S|16S ribosomal RNA|Squatina oculata
CGCCTCTTGATTACTATAAGAGGTCCCGCCTGCCCTGTGACAATGTTTAACGGCCGCGGTATTTTGACCGTGCGAAGGTAGCGTAATCACTTGTCTTTTAAATGAAGACCTGTATGAAAGGCATCACGAGAGTTTAACTGTCTCTATTTTCTAATCAATGAAATTGATTTTCCCGTGAAGAAGCGGGAATAATACCATAAGACGAGAAGACCCTATGGAGCTTCAAACACTTAGATTAATTTTTAAAAATTTTTTTACCCTAAGGGGAAAAAATCCACATAATATTTTTAATTTAATTGTTTTTGGTTGGGGTGACCAAGGGGAAAAACAAATCCCCCTTATCGATTGAGTATTAAATACTTAAAAATTAAAGCGACAGCTTTAATTAATAAAACATTTATCGAACAATGACCCAGGATTTACTGATCAATGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTTTCCTAGAGTCCCTATCGCCGAAAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGTAACCGCTATTAAGGGTTCGTTTGTTCAACGATTAATAGTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>org.aquagene|B218_COI|Cytochrome c oxidase subunit I|Squatina oculata
TAAGCCAGCCCGGAACACTCCTTGGGGACGATCAAATTTACAATGTAATCGTTACTGCCCACGCTTTAGTAATAATCTTTTTTATAGTAATACCAATTATGATTGGAGGCTTTGGAAACTGATTAGTCCCCTTAATAATTGGCGCACCAGATATAGCTTTCCCCCGAATAAATAATATAAGTTTCTGACTCTTACCTCCCTCCCTACTTTTACTACTTGCCTCAGCTGGGGTTGAAGCAGGGGCCGGCACTGGCTGAACGGTCTACCCTCCTCTTGCAGGAAATTTAGCTCACGCCGGAGCTTCAGTAGATCTAGCAATTTTTTCCTTACATTTAGCTGGCATCTCTTCAATCTTAGCCTCTATTAATTTTATCACAACCATTATTAATATAAAACCCCCAGCTATTTCCCAATATCAAACACCACTCTTTGTTTGATCAATCCTTGTGACCACTGTCCTTCTCCTCCTCTCTCTTCCAGTCCTCGCAGCCGCAATCACAATATTACTAACCGACCGTAACCTAAACACAACATTTTTTGACCCTGCAGGGGGTGGGGACCCAATCCTTTATCAACACCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>org.aquagene|B218_COI_2|Cytochrome c oxidase subunit I|Squatina oculata
CACAAAGACATTGGCACCCTTTACTTAATCTTCGGTGCATGAGCAGGAATAGTAGGTACCGCCCTAAGTTTACTTATCCGAGCAGAATTAAGCCAGCCCGGAACACTCCTTGGGGACGATCAAATTTACAATGTAATCGTTACTGCCCACGCTTTAGTAATAATCTTTTTTATAGTAATACCAATTATGATTGGAGGCTTTGGAAACTGATTAGTCCCCTTAATAATTGGCGCACCAGATATAGCTTTCCCCCGAATAAATAATATAAGTTTCTGACTCTTACCTCCCTCCCTACTTTTACTACTTGCCTCAGCTGGGGTTGAAGCAGGGGCCGGCACTGGCTGAACGGTCTACCCTCCTCTTGCAGGAAATTTAGCTCACGCCGGAGCTTCAGTAGATCTAGCAATTTTTTCCTTACATTTAGCTGGCATCTCTTCAATCTTAGCCTCTATTAATTTTATCACAACCATTATTAATATAAAACCCCCAGCTATTTCCCAATATCAAACACCACTCTTTGTTTGATCAATCCTTGTGACCACTGTCCTTCTCCTCCTCTCTCTTCCAGTCCTCGCAGCCGCAATCACAATATTACTAACCGAC
>org.aquagene|B218_ND2|NADH dehydrogenase subunit 2|Squatina oculata
ATAGGCTCACATTGACTATTCATGTGAATAGGCCTAGAAATTAATACCCTAGCTATTACTCCTCTAATAATTAATCAACATCACCCACGAGCAGTAGAAGCAACCACAAAATATTTCATTACACAGGCAACCGCCTCTGCTTTACTCTTATTTGCCAGCGTAACAAACGCCTGAGCTTCAGGAGAGTGAAGCCTTCTTGAAATAATTAATCCAACATCTGCCACACTTGCAACAATCGCACTAGCCTTAAAAATTGGCCTCGCACCTTTACATTTTTGATTACCCGAAGTCCTTCAAGGACTAAACCTCACCACAGGTTTGATCCTATCAACTTGACAAAAACTCGCTCCATTCGCTATCCTTCTTCAATTATACCCCACACTAAACCCAAATCTACTATTATTTTTAGGCATCACCTCTACTGTCGTGGGTGGTTGAGGGGGACTTAACCAAACTCAACTACGAAAAATTCTAGCTTACTCATCAATTGCTCACCTTGGTTGAATGGTTACAATCCTACATTACTCCCCCAATCTTACTCAACTTAACCTAGCCCTATATATCATTATAACCTTAACAACCTTCCTATTTTTCAAAATATTTAACTCCACAAAAATTAACTCCATTTCTACCTCAACAATTAAATCTCCACTACTATCTGTCATTACCATAATAACCCTACTCTCCCTTGGAGGCCTCCCACCACTAACTGGATTTATGCCAAATGATTAATTCTGCAGACTTACTAAACAAATCTAAATTCTAGCTACCGTTATAGCTTTTGCAGCCCTTCTTAGCCTA

AquaGene

A genetic database collaboration developed by the Thünen Institute of Fisheries Ecology together with the Max Rubner-Institute - Department of Safety and Quality of Milk and Fish Products and Impetus Bioscience.

Funded by the German Federal Ministry of Food and Agriculture.

Sample collection performed by the Thünen Institute of Fisheries Ecology in cooperation with the University Mohammed V-Agdal (Morocco), the Instituto Nacional de Desenvolvimento das Pescas (Cape Verde), the National Agricultural Research Institute (The Gambia) and the EAF-Nansen Project.

Funded by the Moroccan Ministry of Higher Education, Scientific Research and Formation of Cadres and the German Federal Ministry of Education and Research.

Contact

Reinhold Hanel (portrait)
Reinhold Hanel portrait

// TODO: These are the details for the Reinhold Hanel portrait ...

Responsible for the content/editorial:
Prof. Dr. Reinhold Hanel

Johann Heinrich von Thünen Institute

Institute of Fisheries Ecology
Herwigstraße 31, 27572 Bremerhaven, Germany
Phone: +49 471 94460 200
Fax: +49 471 94460 199
Email: aquagene@thuenen.de

Headquarter
Johann Heinrich von Thünen Institute
Federal Research Institute for Rural Areas, Forestry and Fisheries
Bundesallee 50, 38116 Braunschweig, Germany
Phone: +49 531 596 1218
Fax: +49 531 596 1099
Email: info@thuenen.de

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