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AquaGene

The curated genetic reference database for fish species
Allowing an unambiguous determination of fisheries products
Do an alignment search against your sequence

Species: Blicca bjoerkna

Family: Cyprinidae

BOLD data

Samples

Sampling location: River Amper canal between Zolling and Haag, trib. to River Isar , Upper Bavaria, Bavaria State
Sampling country: Germany
Sampling latitude: 48.455 °
Sampling longitude: 11.836 °
Sampling date: 20-07-2006
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-034783|ZSM-BayFi 05580_16S|16S ribosomal RNA|Blicca bjoerkna
CGCCTCCTGCAACTACATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAACTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAATTCAACCACGTTAAACGACTCCATAGAAAGCAAGAACTTAGTGGCGAATGAAATTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAAGAAGCCTCCGAGTGGACTGGGCTAAACCCTAAAGCCAAGAGATACATCTACAAGCCGCAGAACATCTGACCAATAATGATCCGACTGAAAAGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-034783|ZSM-BayFi 05580_COI|Cytochrome c oxidase subunit I|Blicca bjoerkna
TTTATCTTGTATTTGGTGCCTGAGCCGGAATAGTGGGGACTGCCCTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGACCAGATTTACAATGTCATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGAGGGTTCGGAAACTGACTCGTCCCACTAATAATCGGTGCGCCTGATATGGCATTCCCACGAATAAATAATATAAGCTTCTGACTTCTACCCCCATCGTTCCTACTACTATTAGCCTCTTCTGGTGTTGAGGCTGGTGCTGGGACAGGATGAACAGTATACCCGCCACTTGCAGGCAATCTCGCCCATGCAGGAGCATCAGTAGATTTAACAATCTTCTCCCTCCACCTAGCAGGTGTATCATCAATTTTAGGGGCAGTCAACTTCATTACCACAATCATTAACATGAAACCCCCAGCCATTTCCCAGTACCAAACACCCCTCTTTGTATGAGCCGTACTAGTAACAGCCGTCCTTCTCCTCCTATCATTACCAGTTTTAGCTGCCGGAATTACAATACTTCTTACAGACCGTAATCTTAATACCACATTCTTCGACCCAGCAGGGGGAGGAGACCCAATCTTATATCAACACTTA
>org.aquagene|ZSM-PIS-034783|ZSM-BayFi 05580_CYB|Cytochrome-b|Blicca bjoerkna
TGGCAAGCCTACGAAAAACCCACCCACTAATAAAAATCGCTAATGACGCACTAGTCGACCTTCCAACACCATCTAACATTTCAGTATTATGAAACTTCGGGTCCCTCCTAGGATTGTGTTTAATTACCCAAATCCTCACGGGATTATTTCTAGCCATGCATTACACCTCTGATATTTCCACCGCATTTTCATCAGTAACCCACATCTGCCGAGACGTTAACTACGGCTGGCTCATTCGAAATTTACACGCTAACGGAGCATCATTCTTCTTCATCTGTCTTTATATACATATTGCACGAGGCCTATACTACGGATCATATCTTTACAAAGAAACCTGAAATATTGGTGTAGTCCTATTTCTTCTAGTTATAATGACAGCCTTCGTCGGCTATGTACTTCCA

Sampling location: Danube River at Jochenstein, SE of Passau
Sampling country: Germany
Sampling latitude: 48.51 °
Sampling longitude: 13.72 °
Sampling date: 05-07-2008
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-037446|ZSM-BayFi 07545_16S|16S ribosomal RNA|Blicca bjoerkna
CGCCTCCTGCAACTACATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAACTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAATTCAACCACGTTAAACGACTCCATAGAAAGCAAGAACTTAGTGGCGAATGAAATTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAAGAAGCCTCCGAGTGGACTGGGCTAAACCCTAAAGCCAAGAGATACATCTACAAGCCGCAGAACATCTGACCAATAATGATCCGACTGAAAAGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-037446|ZSM-BayFi 07545_COI|Cytochrome c oxidase subunit I|Blicca bjoerkna
TTTATCTTGTATTTGGTGCCTGAGCCGGAATAGTGGGGACTGCCCTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGACCAGATTTACAATGTCATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGAGGGTTCGGAAACTGACTCGTCCCACTAATAATCGGTGCGCCTGATATGGCATTCCCACGAATAAATAATATAAGCTTCTGACTTCTACCCCCATCGTTCCTACTACTATTAGCCTCTTCTGGTGTTGAGGCTGGTGCTGGGACAGGATGAACAGTATACCCGCCACTTGCAGGCAATCTCGCCCATGCAGGAGCATCAGTAGATTTAACAATCTTCTCCCTCCACCTAGCAGGTGTATCATCAATTTTAGGGGCAGTCAACTTCATTACCACAATCATTAACATGAAACCCCCAGCCATTTCCCAGTACCAAACACCCCTCTTTGTATGAGCCGTACTAGTAACAGCCGTCCTTCTCCTCCTATCATTACCAGTTTTAGCTGCCGGAATTACAATACTTCTTACAGACCGTAATCTTAATACCACATTCTTCGACCCAGCAGGGGGAGGAGACCCAATCTTATATCAACACTTA
>org.aquagene|ZSM-PIS-037446|ZSM-BayFi 07545_CYB|Cytochrome-b|Blicca bjoerkna
TGGCAAGCCTACGAAAAACCCACCCACTAATAAAAATCGCTAATGACGCACTAGTCGACCTTCCAACACCATCTAACATTTCAGTATTATGAAACTTCGGGTCCCTCCTAGGATTGTGTTTAATTACCCAAATCCTCACGGGATTATTTCTAGCCATACATTACACCTCTGATATTTCCACCGCATTTTCATCAGTAACCCACATCTGCCGAGACGTTAACTACGGCTGACTCATTCGAAATTTACACGCTAACGGAGCATCATTCTTCTTCATCTGTCTTTATATACATATTGCACGAGGCCTATACTACGGATCATATCTTTACAAAGAAACCTGAAA

Sampling location: Rott stream SW of Ruhstorf a.d. Rott, trib. to Inn
Sampling country: Germany
Sampling latitude: 48.43 °
Sampling longitude: 13.334 °
Sampling date: 09-07-2008
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-037483|ZSM-BayFi 07644_16S|16S ribosomal RNA|Blicca bjoerkna
CGCCTCCTGCAACTACATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAACTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAATTCAACCACGTTAAACGACTCCATAGAAAGCAAGAACTTAGTGGCGAATGAAATTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAAGAAGCCTCCGAGTGGACTGGGCTAAACCCTAAAGCCAAGAGATACATCTACAAGCCGCAGAACATCTGACCAATAATGATCCGACTGAAAAGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-037483|ZSM-BayFi 07644_COI|Cytochrome c oxidase subunit I|Blicca bjoerkna
TTTATCTTGTATTTGGTGCCTGAGCCGGAATAGTGGGGACTGCCCTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGACCAGATTTACAATGTCATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGAGGGTTCGGAAACTGACTCGTCCCACTAATAATCGGTGCGCCTGATATGGCATTCCCACGAATAAATAATATAAGCTTCTGACTTCTACCCCCATCGTTCCTACTACTATTAGCCTCTTCTGGTGTTGAGGCTGGTGCTGGGACAGGATGAACAGTATACCCGCCACTTGCAGGCAATCTCGCCCATGCAGGAGCATCAGTAGATTTAACAATCTTCTCCCTCCACCTAGCAGGTGTATCATCAATTTTAGGGGCAGTCAACTTCATTACCACAATCATTAACATGAAACCCCCAGCCATTTCCCAGTACCAAACACCCCTCTTTGTATGAGCCGTACTAGTAACAGCCGTCCTTCTCCTCCTATCATTACCAGTTTTAGCTGCCGGAATTACAATACTTCTTACAGACCGTAATCTTAATACCACATTCTTCGACCCAGCAGGGGGAGGAGACCCAATCTTATATCAACACTTA
>org.aquagene|ZSM-PIS-037483|ZSM-BayFi 07644_CYB|Cytochrome-b|Blicca bjoerkna
TGGCAAGCCTACGAAAAACCCACCCACTAATAAAAATCGCTAATGACGCACTAGTCGACCTTCCAACACCATCTAACATTTCAGTATTATGAAACTTCGGGTCCCTCCTAGGATTGTGTTTAATTACCCAAATCCTCACGGGATTATTTCTAGCCATACATTACACCTCTGATATTTCCACCGCATTTTCATCAGTAACCCACATCTGCCGAGACGTTAACTACGGCTGGCTCATTCGAAATTTACACGCTAACGGAGCATCATTCTTCTTCATCTGTCTTTATATACATATTGCACGAGGCCTATACTACGGATCATATCTTTACAAAGAAACCTGAAATATTGGTGTAGTCCTATTTCTTCTAGTTATAATGACAGCCTTCGTCGGCTATGTACTTCCA

AquaGene

A genetic database collaboration developed by the Thünen Institute of Fisheries Ecology together with the Max Rubner-Institute - Department of Safety and Quality of Milk and Fish Products and Impetus Bioscience.

Funded by the German Federal Ministry of Food and Agriculture.

Sample collection performed by the Thünen Institute of Fisheries Ecology in cooperation with the University Mohammed V-Agdal (Morocco), the Instituto Nacional de Desenvolvimento das Pescas (Cape Verde), the National Agricultural Research Institute (The Gambia) and the EAF-Nansen Project.

Funded by the Moroccan Ministry of Higher Education, Scientific Research and Formation of Cadres and the German Federal Ministry of Education and Research.

Contact

Reinhold Hanel (portrait)
Reinhold Hanel portrait

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Responsible for the content/editorial:
Prof. Dr. Reinhold Hanel

Johann Heinrich von Thünen Institute

Institute of Fisheries Ecology
Herwigstraße 31, 27572 Bremerhaven, Germany
Phone: +49 471 94460 200
Fax: +49 471 94460 199
Email: aquagene@thuenen.de

Headquarter
Johann Heinrich von Thünen Institute
Federal Research Institute for Rural Areas, Forestry and Fisheries
Bundesallee 50, 38116 Braunschweig, Germany
Phone: +49 531 596 1218
Fax: +49 531 596 1099
Email: info@thuenen.de

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