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AquaGene

The curated genetic reference database for fish species
Allowing an unambiguous determination of fisheries products
Do an alignment search against your sequence

Species: Leuciscus idus

Family: Cyprinidae

BOLD data

Samples

Sampling location: Fraenkische Saale river at Gemuenden, tributary to Main river, Lower Franconia, Bavaria State
Sampling country: Germany
Sampling latitude: 50.06 °
Sampling longitude: 9.689 °
Sampling date: 21-09-2005
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-033752|ZSM-BayFi 04192_16S|16S ribosomal RNA|Leuciscus idus
CGCCTCCTGCAACTATATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCTTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAGTTCAACCACGTTAAACGACTCCACAGAAAGCAAGAACTTAGTGGCAAATGAAACTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAGAAAGCCTCCGAGTGGACTGGGCTAAAtCCCCAAAGCCAAGAGATACATCTATAAGCCGCAGAACATCTGACCAAGAATGATCCGACTGAAAGGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-033752|ZSM-BayFi 04192_COI|Cytochrome c oxidase subunit I|Leuciscus idus
TTTATCTTGTATTTGGTGCCTGAGCCGGAATGGTGGGGACTGCCCTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGACCAAATTTACAATGTTATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGCGGGTTCGGAAATTGACTCGTCCCACTAATGATTGGCGCGCCTGACATGGCATTCCCGCGAATGAATAATATAAGCTTCTGACTTCTACCCCCGTCATTCCTACTGCTATTAGCTTCTTCTGGTGTTGAAGCCGGAGCCGGGACAGGATGAACAGTGTATCCCCCACTTGCAGGCAATCTCGCCCACGCAGGAGCATCAGTAGACTTAACAATCTTCTCGCTCCACCTAGCAGGTGTATCATCAATTTTAGGCGCGGTCAACTTCATCACTACAATTATTAACATGAAACCCCCAGCCATCTCCCAGTATCAAACACCGCTCTTTGTATGAGCCGTGCTGGTAACAGCCGTCCTTCTCCTTCTATCATTACCAGTCTTAGCTGCCGGAATTACAATACTTCTTACAGATCGTAATCTTAATACCACGTTCTTTGATCCGGCA
>org.aquagene|ZSM-PIS-033752|ZSM-BayFi 04192_CYB|Cytochrome-b|Leuciscus idus
TGGCAAGCCTACGAAAAACCCATCCGTTAATAAAAATCGCTAATGACGCACTAGTCGACCTTCCAACCCCATCCAACATTTCGGCCCTCTGAAACTTCGGGTCCCTCCTAGGATTATGTTTAATTACCCAAATCCTAACAGGATTATTTTTAGCCATGCACTACACCTCTGATATTTCAACCGCATTTTCATCAGTAACTCACATTTGTCGGGACGTTAACTACGGCTGGCTTATCCGAAACCTGCACGCCAACGGGGCGTCATTCTTCTTCATCTGTATTTATATACATATCGCGCGAGGCCTGTATTACGGGTCCTATCTTTATAAGGAGACCTGAAATATTGGTGTAGTACTACTTCTTCTAGTCATAGCAACCGCCTTCGTGGGCTATGTGCTTCCG

Sampling location: Fraenkische Saale river at Gemuenden, tributary to Main river, Lower Franconia, Bavaria State
Sampling country: Germany
Sampling latitude: 50.06 °
Sampling longitude: 9.689 °
Sampling date: 21-09-2005
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-033752|ZSM-BayFi 04194_16S|16S ribosomal RNA|Leuciscus idus
CGCCTCCTGCAACTATATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCTTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAGTTCAACCACGTTAAACGACTCCACAGAAAGCAAGAACTTAGTGGCAAATGAAACTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAGAAAGCCTCCGAGTGGACTGGGCTAAAtCCCCAAAGCCAAGAGATACATCTATAAGCCGCAGAACATCTGACCAAGAATGATCCGACTGAAAGGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-033752|ZSM-BayFi 04194_COI|Cytochrome c oxidase subunit I|Leuciscus idus
TTTATCTTGTATTTGGTGCCTGAGCCGGAATGGTGGGGACTGCCCTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGACCAAATTTACAATGTTATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGCGGGTTCGGAAATTGACTCGTCCCACTAATGATTGGCGCGCCTGACATGGCATTCCCGCGAATGAATAATATAAGCTTCTGACTTCTACCCCCGTCATTCCTACTGCTATTAGCTTCTTCTGGTGTTGAAGCCGGAGCCGGGACAGGATGAACAGTGTATCCCCCACTTGCAGGCAATCTCGCCCACGCAGGAGCATCAGTAGACTTAACAATCTTCTCGCTCCACCTAGCAGGTGTATCATCAATTTTAGGCGCGGTCAACTTCATCACTACAATTATTAACATGAAACCCCCAGCCATCTCCCAGTATCAAACACCGCTCTTTGTATGAGCCGTGCTGGTAACAGCCGTCCTTCTCCTTCTATCATTACCAGTCTTAGCTGCCGGAATTACAATACTTCTTACAGATCGTAATCTTAATACCACGTTCTTTGATCCGGCAGGGGGAGGTGACCCGATCCTGTACCAACACTTA
>org.aquagene|ZSM-PIS-033752|ZSM-BayFi 04194_CYB|Cytochrome-b|Leuciscus idus
TGGCAAGCCTACGAAAAACCCATCCGTTAATAAAAATCGCTAATGACGCACTAGTCGACCTTCCAACCCCATCCAACATTTCGGCCCTCTGAAACTTCGGGTCCCTCCTAGGATTATGTTTAATTACCCAAATCCTAACAGGATTATTTTTAGCCATGCACTACACCTCTGATATTTCAACCGCATTTTCATCAGTAACTCACATTTGTCGGGACGTTAACTACGGCTGGCTTATCCGAAACCTGCACGCCAACGGGGCGTCATTCTTCTTCATCTGTATTTATATACATATCGCGCGAGGCCTGTATTACGGGTCCTATCTTTATAAGGAGACCTGAAATATTGGTGTAGTACTACTTCTTCTAGTCATAGCAACCGCCTTCGTGGGCTATGTGCTTCCG

Sampling location: Main river at Nordheim, ferry boat place, E of Wuerzburg
Sampling country: Germany
Sampling latitude: 49.86 °
Sampling longitude: 10.179 °
Sampling date: 12-10-2005
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-033899|ZSM-BayFi 04775_16S|16S ribosomal RNA|Leuciscus idus
CGCCTCCTGCAACTATATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCTTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAGTTCAACCACGTTAAACGACTCCACAGAAAGCAAGAACTTAGTGGCAAATGAAACTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAGAAAGCCTCCGAGTGGACTGGGCTAAAtCCCCAAAGCCAAGAGATACATCTATAAGCCGCAGAACATCTGACCAAGAATGATCCGACTGAAAGGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-033899|ZSM-BayFi 04775_COI|Cytochrome c oxidase subunit I|Leuciscus idus
TTTATCTTGTATTTGGTGCCTGAGCCGGAATGGTGGGGACTGCCCTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGACCAAATTTACAATGTTATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGCGGGTTCGGAAATTGACTCGTCCCACTAATGATTGGCGCGCCTGACATGGCATTCCCGCGAATGAATAATATAAGCTTCTGACTTCTACCCCCGTCATTCCTACTGCTATTAGCTTCTTCTGGTGTTGAAGCCGGAGCCGGGACAGGATGAACAGTGTATCCCCCACTTGCAGGCAATCTCGCCCACGCAGGAGCATCAGTAGACTTAACAATCTTCTCGCTCCACCTAGCAGGTGTATCATCAATTTTAGGCGCGGTCAACTTCATCACTACAATTATTAACATGAAACCCCCAGCCATCTCCCAGTATCAAACACCGCTCTTTGTATGAGCCGTGCTGGTAACAGCCGTCCTTCTCCTTCTATCATTACCAGTCTTAGCTGCCGGAATTACAATACTTCTTACAGATCGTAATCTTAATACCACGTTCTTTGATCCGGCAGGGGGAGGTGACCCGATCCTGTACCAACACTTA
>org.aquagene|ZSM-PIS-033899|ZSM-BayFi 04775_CYB|Cytochrome-b|Leuciscus idus
TGGCAAGCCTACGAAAAACCCATCCGTTAATAAAAATCGCTAATGACGCACTAGTCGACCTTCCAACCCCATCCAACATTTCGGCCCTCTGAAACTTCGGGTCCCTCCTAGGATTATGTTTAATTACCCAAATCCTAACAGGATTATTTTTAGCCATGCACTACACCTCTGATATTTCAACCGCATTTTCATCAGTAACTCACATTTGTCGGGACGTTAACTACGGCTGGCTTATCCGAAACCTGCACGCCAACGGGGCGTCATTCTTCTTCATCTGTATTTATATACATATCGCGCGAGGCCTGTATTACGGGTCCTATCTTTATAAGGAGACCTGAAATATTGGTGTAGTACTACTTCTTCTAGTCATAGCAACCGCCTTCGTGGGCTATGTGCTTCCG

Sampling location: River Amper canal between Zolling and Haag, trib. to River Isar , Upper Bavaria, Bavaria State
Sampling country: Germany
Sampling latitude: 48.455 °
Sampling longitude: 11.836 °
Sampling date: 18-07-2006
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-034778|ZSM-BayFi 05446_16S|16S ribosomal RNA|Leuciscus idus
CGCCTCCTGCAACTATATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCTTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAGTTCAACCACGTTAAACGACTCCACAGAAAGCAAGAACTTAGTGGCAAATGAAACTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAGAAAGCCTCCGAGTGGACTGGGCTAAAtCCCCAAAGCCAAGAGATACATCTATAAGCCGCAGAACATCTGACCAAGAATGATCCGACTGAAAGGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-034778|ZSM-BayFi 05446_COI|Cytochrome c oxidase subunit I|Leuciscus idus
TCTTGTATTTGGTGCCTGAGCCGGAATGGTGGGGACTGCCCTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGACCAAATTTACAATGTTATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGCGGGTTCGGAAATTGACTCGTCCCACTAATGATTGGCGCGCCTGACATGGCATTCCCGCGAATGAATAATATAAGCTTCTGACTTCTACCCCCGTCATTCCTACTGCTATTAGCTTCTTCTGGTGTTGAAGCCGGAGCCGGGACAGGATGAACAGTGTATCCCCCACTTGCAGGCAATCTCGCCCACGCAGGAGCATCAGTAGACTTAACAATCTTCTCGCTCCACCTAGCAGGTGTATCATCAATTTTAGGCGCGGTCAACTTCATCACTACAATTATTAACATGAAACCCCCAGCCATCTCCCAGTATCAAACACCGCTCTTTGTATGAGCCGTGCTGGTAACAGCCGTCCTTCTCCTTCTGTCATTACCAGTCTTAGCTGCCGGAATTACAATACTTCTTACAGATCGTAATCTTAATACCACGTTCTTTGATCCGGCA
>org.aquagene|ZSM-PIS-034778|ZSM-BayFi 05446_CYB|Cytochrome-b|Leuciscus idus
TGGCAAGCCTACGAAAAACCCATCCGTTAATAAAAATCGCTAATGACGCACTAGTCGACCTTCCAACCCCATCCAACATTTCGGCCCTCTGAAACTTCGGGTCCCTCCTAGGATTATGTTTAATTACCCAAATCCTAACAGGATTATTTTTAGCCATGCACTACACCTCTGATATTTCAACCGCATTTTCATCAGTAACTCACATTTGTCGGGACGTTAACTACGGCTGGCTTATCCGAAACCTGCACGCCAACGGGGCGTCATTCTTCTTCATCTGTATTTATATACATATCGCGCGAGGCCTGTATTACGGGTCCTATCTTTATAAGGAGACCTGAAATATTGGTGTAGTACTACTTCTTCTAGTCATAGCAACCGCCTTCGTGGGCTATGTGCTTCCG

Sampling location: Lower Bavaria, Inn River below dam Ingling downstream to mouth in n Passau ("Fuenferlsteg")
Sampling country: Germany
Sampling latitude: 48.571 °
Sampling longitude: 13.461 °
Sampling date: 30-09-2008
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-038506|ZSM-BayFi 08266_16S|16S ribosomal RNA|Leuciscus idus
CGCCTCCTGCAACTATATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCTTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAGTTCAACCACGTTAAACGACTCCACAGAAAGCAAGAACTTAGTGGCAAATGAAACTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAGAAAGCCTCCGAGTGGACTGGGCTAAAtCCCCAAAGCCAAGAGATACATCTATAAGCCGCAGAACATCTGACCAAGAATGATCCGACTGAAAGGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-038506|ZSM-BayFi 08266_COI|Cytochrome c oxidase subunit I|Leuciscus idus
TCTTGTATTTGGTGCCTGAGCCGGAATGGTGGGGACTGCCCTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGACCAAATTTACAATGTTATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGCGGGTTCGGAAATTGACTCGTCCCACTAATGATTGGCGCGCCTGACATGGCATTCCCGCGAATGAATAATATAAGCTTCTGACTTCTACCCCCGTCATTCCTACTGCTATTAGCTTCTTCTGGTGTTGAAGCCGGAGCTGGGACAGGATGAACAGTGTATCCCCCACTTGCAGGCAATCTCGCCCACGCAGGAGCATCAGTAGACTTAACAATCTTCTCGCTCCACCTAGCAGGTGTATCATCAATTTTAGGCGCGGTCAACTTCATCACTACAATTATTAACATGAAACCCCCAGCCATCTCCCAGTATCAAACACCGCTCTTTGTATGAGCCGTGCTGGTAACAGCCGTCCTTCTCCTTCTATCATTACCAGTCTTAGCTGCCGGAATTACAATACTTCTTACAGATCGTAATCTTAATACCACATTCTTCGATCCGGCA
>org.aquagene|ZSM-PIS-038506|ZSM-BayFi 08266_CYB|Cytochrome-b|Leuciscus idus
TGGCAAGCCTACGAAAAACCCATCCGTTAATAAAAATCGCTAATGACGCACTAGTCGACCTTCCAACCCCATCCAACATTTCGGCCCTCTGAAACTTCGGGTCCCTCCTAGGATTATGTTTAATTACCCAAATCCTAACAGGATTATTTTTAGCCATGCACTACACCTCTGATATTTCAACCGCATTTTCATCAGTAACTCACATTTGTCGGGACGTTAACTACGGCTGGCTTATCCGAAACCTGCACGCCAACGGGGCGTCATTCTTCTTCATCTGTATTTATATACATATCGCGCGAGGCCTGTATTACGGGTCCTATCTTTATAAGGAGACCTGAAATATTGGTGTAGTACTACTTCTTCTAGTCA

AquaGene

A genetic database collaboration developed by the Thünen Institute of Fisheries Ecology together with the Max Rubner-Institute - Department of Safety and Quality of Milk and Fish Products and Impetus Bioscience.

Funded by the German Federal Ministry of Food and Agriculture.

Sample collection performed by the Thünen Institute of Fisheries Ecology in cooperation with the University Mohammed V-Agdal (Morocco), the Instituto Nacional de Desenvolvimento das Pescas (Cape Verde), the National Agricultural Research Institute (The Gambia) and the EAF-Nansen Project.

Funded by the Moroccan Ministry of Higher Education, Scientific Research and Formation of Cadres and the German Federal Ministry of Education and Research.

Contact

Reinhold Hanel (portrait)
Reinhold Hanel portrait

// TODO: These are the details for the Reinhold Hanel portrait ...

Responsible for the content/editorial:
Prof. Dr. Reinhold Hanel

Johann Heinrich von Thünen Institute

Institute of Fisheries Ecology
Herwigstraße 31, 27572 Bremerhaven, Germany
Phone: +49 471 94460 200
Fax: +49 471 94460 199
Email: aquagene@thuenen.de

Headquarter
Johann Heinrich von Thünen Institute
Federal Research Institute for Rural Areas, Forestry and Fisheries
Bundesallee 50, 38116 Braunschweig, Germany
Phone: +49 531 596 1218
Fax: +49 531 596 1099
Email: info@thuenen.de

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