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AquaGene

The curated genetic reference database for fish species
Allowing an unambiguous determination of fisheries products
Do an alignment search against your sequence

Species: Phoxinus phoxinus

Family: Cyprinidae

BOLD data

Samples

Sampling location: Westliche Guenz stream, tributary to Guenz river, upstream of Westerheim near Memmingen
Sampling country: Germany
Sampling latitude: 47.996 °
Sampling longitude: 10.292 °
Sampling date: 17-06-2006
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-031526|ZSM-BayFi 01152_16S|16S ribosomal RNA|Phoxinus phoxinus
CGCCTCCTGCAACTAGATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTATGGGTTTAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCGGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGATATAAATACACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAGCTTACCCACGTTAAACGACTTTATAAGAAGCAAGAACTTAGTGGCAATAAGACTTTACCTTCGGTTGGGGCGACCATGGAGGAGAAACAAGCCTCCAAGTGGGCCGGGCCAAACCCCcttccctAAAGCCAAGAGACACATCTCTAGGCCGCAGGACATCTGACCAAAAATGATCCGACTATAAAGTCGACCAACGGACCAAGTTACCCAAGGGATAACAGCGCAATCCCCTCCCAGAGTCCATATCTACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-031526|ZSM-BayFi 01152_COI|Cytochrome c oxidase subunit I|Phoxinus phoxinus
TTTATCTTGTATTTGGTGCCTGAGCCGGAATGGTAGGGACCGCCCTAAGCCTTCTTATTCGGGCCGAACTAAGCCAGCCTGGATCACTCTTAGGTGATAGCCAAATTTATAATGTTATTGTTACCGCCCATGCCTTCGTAATAATTTTCTTTATAGTTATGCCAATTCTTATCGGTGGATTTGGCAACTGGCTTGTACCTCTAATAATTGGTGCACCTGACATAGCCTTTCCCCGAATGAATAATATAAGTTTTTGACTTCTACCCCCATCATTCCTTCTTCTGCTAGCTTCTTCTGGTGTTGAAGCCGGGGCCGGGACAGGTTGAACCGTATACCCCCCACTCGCAGGCAACCTTGCCCATGCAGGTGCATCAGTAGACCTTACGATCTTCTCACTTCATCTAGCAGGTGTATCATCAATTTTAGGGGCAGTCAACTTTATTACTACAATTATTAATATGAAGCCCCCAGCCATCTCCCAGTATCAAACCCCTCTCTTCGTATGGGCCGTGCTCGTAACAGCCGTCCTACTCCTACTATCCCTACCAGTACTAGCTGCCGGAATTACAATGCTTCTTACAGATCGTAATCTTAATACCACATTCTTCGACCCTGCGGGAGGAGGAGACCCAATTTTATATCAACACCTC
>org.aquagene|ZSM-PIS-031526|ZSM-BayFi 01152_CYB|Cytochrome-b|Phoxinus phoxinus
TGGCAAGCCTACGAAAGACGCATCCACTAATAAAAATCGCCAACGGCGCACTCGTTGACCTCCCAACACCCTCCAATATTTCTGCACTCTGGAACTTTGGTTCTCTTCTAGGATTGTGTTTAATTACCCAAATTCTCACAGGACTATTTCTAGCCATACATTATACATCTGACATCTCAACCGCGTTTTCATCGGTCACCCATATCTGCCGAGACGTTAATTATGGGTGACTAATTCGAAATATACACGCCAACGGCGCATCATTCTTCTTTATCTGTATTTATATGCATATTGCCCGAGGTCTTTATTATGGTTCATACCTTTATAAGGAAACCTGGAATATCGGTGTAGTTCTACTCCTCCTGGTAATAATAACGGCCTTTGTGGGCTACGTCCTTCCA

Sampling location: Brend creek upriver of Brendlorenzen, trib. to Fraenkische Saale / Bad Neustadt a.d. Saale
Sampling country: Germany
Sampling latitude: 50.332 °
Sampling longitude: 10.191 °
Sampling date: 27-09-2005
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-033812|ZSM-BayFi 04315_16S|16S ribosomal RNA|Phoxinus phoxinus
CGCCTCCTGCAACTAGATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTATGGGTTTAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCGGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGATATAAATACACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAGCTTACCCACGTTAAACGACTTTATAAGAAGCAAGAACTTAGTGGCAATAAGACTTTACCTTCGGTTGGGGCGACCATGGAGGAGAAACAAGCCTCCAAGTGGGCCGGGCCAAACCCCcttccctAAAGCCAAGAGACACATCTCTAGGCCGCAGGACATCTGACCAAAAATGATCCGACTATAAAGTCGACCAACGGACCAAGTTACCCAAGGGATAACAGCGCAATCCCCTCCCAGAGTCCATATCTACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-033812|ZSM-BayFi 04315_COI|Cytochrome c oxidase subunit I|Phoxinus phoxinus
TTTATCTTGTATTTGGTGCCTGAGCCGGAATGGTAGGGACCGCCCTAAGCCTTCTTATTCGGGCCGAACTAAGCCAGCCTGGATCACTCTTAGGTGATAGCCAAATTTATAATGTTATTGTTACCGCCCATGCCTTCGTAATAATTTTCTTTATAGTCATGCCAATTCTTATCGGTGGATTTGGCAACTGGCTTGTACCTCTAATAATTGGTGCACCTGACATAGCCTTTCCCCGAATAAATAATATAAGTTTTTGACTTCTACCCCCATCATTCCTTCTTCTGCTAGCTTCTTCTGGTGTTGAAGCCGGGGCCGGGACAGGTTGAACCGTATACCCCCCACTCGCAGGCAACCTTGCCCATGCAGGTGCATCAGTAGACCTTACGATCTTCTCACTTCATCTAGCAGGTGTATCATCAATTTTAGGGGCAGTCAACTTTATTACTACAATTATTAATATGAAGCCCCCAGCCATCTCCCAGTATCAAACCCCTCTCTTCGTATGGGCCGTGCTCGTAACAGCCGTCCTACTCCTACTATCCCTACCAGTACTAGCTGCCGGAATTACAATGCTTCTTACAGATCGTAATCTTAATACCACATTCTTCGACCCTGCGGGAGGAGGAGACCCAATTTTATATCAACACCTC
>org.aquagene|ZSM-PIS-033812|ZSM-BayFi 04315_CYB|Cytochrome-b|Phoxinus phoxinus
TGGCAAGCCTACGAAAGACGCATCCACTAATAAAAATCGCCAACGGCGCACTCGTTGACCTCCCAACACCCTCCAATATTTCTGCACTCTGGAACTTTGGTTCTCTTCTAGGATTGTGTTTAATTACCCAAATTCTCACAGGACTATTTCTAGCCATACATTATACATCTGACATCTCAACCGCATTTTCATCGGTCACCCATATCTGCCGAGACGTTAATTATGGGTGACTAATTCGAAATATACACGCCAACGGCGCATCATTCTTCTTTATCTGTATTTATATGCATATTGCCCGAGGTCTTTATTATGGTTCATACCTTTATAAGGAAACCTGGAATATCGGTGTAGTTCTACTCCTCCTGGTAATAATAACGGCCTTTGTGGGCTACGTCCTTCCA

Sampling location: Brend creek upriver of Brendlorenzen, trib. to Fraenkische Saale / Bad Neustadt a.d. Saale, Lower Franconia, Bavaria State
Sampling country: Germany
Sampling latitude: 50.577 °
Sampling longitude: 10.308 °
Sampling date: 27-09-2005
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-033812|ZSM-BayFi 04316_16S|16S ribosomal RNA|Phoxinus phoxinus
CGCCTCCTGCAACTAGATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTATGGGTTTAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCGGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGATATAAATACACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAGCTTACCCACGTTAAACGACTTTATAAGAAGCAAGAACTTAGTGGCAATAAGACTTTACCTTCGGTTGGGGCGACCATGGAGGAGAAACAAGCCTCCAAGTGGGCCGGGCCAAACCCCcttccctAAAGCCAAGAGACACATCTCTAGGCCGCAGGACATCTGACCAAAAATGATCCGACTATAAAGTCGACCAACGGACCAAGTTACCCAAGGGATAACAGCGCAATCCCCTCCCAGAGTCCATATCTACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-033812|ZSM-BayFi 04316_COI|Cytochrome c oxidase subunit I|Phoxinus phoxinus
TTCTTATTCGGGCCGAACTAAGCCAGCCTGGATCACTCTTAGGTGATAGCCAAATTTATAATGTTATTGTTACCGCCCATGCCTTCGTAATAATTTTCTTTATAGTCATGCCAATTCTTATCGGTGGATTTGGCAACTGGCTTGTACCTCTAATAATTGGTGCACCTGACATAGCCTTTCCCCGAATAAATAATATAAGTTTTTGACTTCTACCCCCATCATTCCTTCTTCTGCTAGCTTCTTCTGGTGTTGAAGCCGGGGCCGGGACAGGTTGAACCGTATACCCCCCACTCGCAGGCAACCTTGCCCATGCAGGTGCATCAGTAGACCTTACGATCTTCTCACTTCATCTAGCAGGTGTATCATCAATTTTAGGGGCAGTCAACTTTATTACTACAATTATTAATATGAAGCCCCCAGCCATCTCCCAGTATCAAACCCCTCTCTTCGTATGGGCCGTGCTCGTAACAGCCGTCCTACTCCTACTATCCCTACCAGTACTAGCTGCCGGAATTACAATGCTTCTTACAGATCGTAATCTTAATACCACA
>org.aquagene|ZSM-PIS-033812|ZSM-BayFi 04316_CYB|Cytochrome-b|Phoxinus phoxinus
TGGCAAGCCTACGAAAGACGCATCCACTAATAAAAATCGCCAACGGCGCACTCGTTGACCTCCCAACACCCTCCAATATTTCTGCACTCTGGAACTTTGGTTCTCTTCTAGGATTGTGTTTAATTACCCAAATTCTCACAGGACTATTTCTAGCCATACATTATACATCTGACATCTCAACCGCATTTTCATCGGTCACCCATATCTGCCGAGACGTTAATTATGGGTGACTAATTCGAAATATACACGCCAACGGCGCATCATTCTTCTTTATCTGTATTTATATGCATATTGCCCGAGGTCTTTATTATGGTTCATACCTTTATAAGGAAACCTGGAATATCGGTGTAGTTCTACTCCTCCTGGTAATAATAACGGCCTTTGTGGGCTACGTCCTTCCA

Sampling location: Pfoerreraugraben at Freising, trib. to Isar River
Sampling country: Germany
Sampling latitude: 48.35 °
Sampling longitude: 11.733 °
Sampling date: 17-06-2006
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-034597|ZSM-BayFi 05281_16S|16S ribosomal RNA|Phoxinus phoxinus
CGCCTCCTGCAACTAGATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTATGGGTTTAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCGGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGATATAAATACACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAGCTTACCCACGTTAAACGACTTTATAAGAAGCAAGAACTTAGTGGCAATAAGACTTTACCTTCGGTTGGGGCGACCATGGAGGAGAAACAAGCCTCCAAGTGGGCCGGGCCAAACCCCcttccctAAAGCCAAGAGACACATCTCTAGGCCGCAGGACATCTGACCAAAAATGATCCGACTATAAAGTCGACCAACGGACCAAGTTACCCAAGGGATAACAGCGCAATCCCCTCCCAGAGTCCATATCTACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-034597|ZSM-BayFi 05281_COI|Cytochrome c oxidase subunit I|Phoxinus phoxinus
TTTATCTTGTATTTGGTGCCTGAGCCGGAATGGTAGGGACCGCCCTAAGCCTTCTTATTCGGGCCGAACTAAGCCAGCCTGGATCACTCTTAGGTGATAGCCAAATTTATAATGTTATTGTTACCGCCCATGCCTTCGTAATAATTTTCTTTATAGTCATGCCAATTCTTATCGGTGGATTTGGCAACTGGCTTGTACCTCTAATAATTGGTGCACCTGACATAGCCTTTCCCCGAATAAATAATATAAGTTTTTGACTTCTACCCCCATCATTCCTTCTTCTGCTAGCTTCTTCTGGTGTTGAAGCCGGGGCCGGGACAGGTTGAACCGTATACCCCCCACTCGCAGGCAACCTTGCCCATGCAGGTGCATCAGTAGACCTTACGATCTTCTCACTTCATCTAGCAGGTGTATCATCAATTTTAGGGGCAGTCAACTTTATTACTACAATTATTAATATGAAGCCCCCAGCCATCTCCCAGTATCAAACCCCTCTCTTCGTATGGGCCGTGCTCGTAACAGCCGTCCTACTCCTACTATCCCTACCAGTACTAGCTGCCGGAATTACAATGCTTCTTACAGATCGTAATCTTAATACCACATTCTTCGACCCTGCGGGAGGAGGAGACCCAATTTTATATCAACACCTC
>org.aquagene|ZSM-PIS-034597|ZSM-BayFi 05281_CYB|Cytochrome-b|Phoxinus phoxinus
TGGCAAGCCTACGAAAGACGCATCCACTAATAAAAATCGCCAACGGCGCACTCGTTGACCTCCCAACACCCTCCAATATTTCTGCACTCTGGAACTTTGGTTCTCTTCTAGGATTGTGTTTAATTACCCAAATTCTCACAGGACTATTTCTAGCCATACATTATACATCTGACATCTCAACCGCATTTTCATCGGTCACCCATATCTGCCGAGACGTTAATTACGGGTGACTAATTCGAAATATACACGCCAACGGCGCATCATTCTTCTTTATCTGTATTTATATGCATATTGCCCGAGGTCTTTATTATGGTTCATACCTTTATAAGGAAACCTGGAATATCGGTGTAGTTCTACTCCTCCTGGTAATAATAACGGCCTTTGTGGGCTACGTCCTTCCA

AquaGene

A genetic database collaboration developed by the Thünen Institute of Fisheries Ecology together with the Max Rubner-Institute - Department of Safety and Quality of Milk and Fish Products and Impetus Bioscience.

Funded by the German Federal Ministry of Food and Agriculture.

Sample collection performed by the Thünen Institute of Fisheries Ecology in cooperation with the University Mohammed V-Agdal (Morocco), the Instituto Nacional de Desenvolvimento das Pescas (Cape Verde), the National Agricultural Research Institute (The Gambia) and the EAF-Nansen Project.

Funded by the Moroccan Ministry of Higher Education, Scientific Research and Formation of Cadres and the German Federal Ministry of Education and Research.

Contact

Reinhold Hanel (portrait)
Reinhold Hanel portrait

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Responsible for the content/editorial:
Prof. Dr. Reinhold Hanel

Johann Heinrich von Thünen Institute

Institute of Fisheries Ecology
Herwigstraße 31, 27572 Bremerhaven, Germany
Phone: +49 471 94460 200
Fax: +49 471 94460 199
Email: aquagene@thuenen.de

Headquarter
Johann Heinrich von Thünen Institute
Federal Research Institute for Rural Areas, Forestry and Fisheries
Bundesallee 50, 38116 Braunschweig, Germany
Phone: +49 531 596 1218
Fax: +49 531 596 1099
Email: info@thuenen.de

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