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AquaGene

The curated genetic reference database for fish species
Allowing an unambiguous determination of fisheries products
Do an alignment search against your sequence

Species: Salmo trutta

Family: Salmonidae

BOLD data

Samples

Sampling location: Lech river upriver of Lech fall at Fuessen, river-km 167.4
Sampling country: Germany
Sampling latitude: 49.816 °
Sampling longitude: 11.292 °
Sampling date: 15-09-2004
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-031542|ZSM-BayFi 01081_16S|16S ribosomal RNA|Salmo trutta
AAGAGGTCCCGCCTGCCCTGTGACTATGGGTTTAACGGCCGCGGTATTTTGACCGTGCGAAGGTAGCGCAATCACTTGTCTTTTAAATGAAGACCTGTATGAATGGCATCACGAGGGCTTAGCTGTCTCCTCTTCCAAGTCAATGAAATTGATCTGCCCGTGCAGAAGCGGACATAAACACATAAGACGAGAAGACCCTATGGAGCTTTAGACACCAGGCAGATCACGTCAAGTAACCTTAAATTAACAGGTAAAAACACAGTGACCCCTAGCCCCTATGTCTTTGGTTGGGGCGACCGCGGGGGAAAACAAAGCCCCCATGTGGACTGGGGGCACTGCCCCCACAACCAAGAGCCACAACTCTAAGTACCAGAATTTCTGACCAAAAATGATCCGGCGAACGCCGATCAACGGACCGAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCCTATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-031542|ZSM-BayFi 01081_COI|Cytochrome c oxidase subunit I|Salmo trutta
TCTATTTAGTATTTGGTGCCTGAGCCGGGATAGTCGGCACCGCCCTAAGTCTCTTGATTCGGGCAGAACTCAGCCAACCCGGCGCCCTCCTAGGGGATGACCAGATTTATAACGTAATTGTTACAGCCCATGCCTTCGTAATAATTTTCTTTATAGTCATACCAATTATGATCGGCGGCTTTGGAAACTGATTAATCCCTCTCATAATCGGAGCCCCCGACATAGCATTCCCCCGAATGAATAACATAAGCTTCTGACTCCTCCCTCCGTCCTTTCTTCTCCTCCTAGCCTCGTCTGGAGTTGAAGCCGGCGCTGGCACAGGATGAACAGTCTACCCCCCTCTAGCCGGCAATCTTGCCCACGCAGGAGCTTCCGTTGACTTAACTATTTTCTCCCTCCATTTAGCTGGTATTTCCTCAATTTTGGGGGCCATTAATTTTATTACGACCATTATTAACATAAAACCCCCAGCCATCTCCCAATATCAAACTCCACTTTTTGTTTGGGCCGTGTTAGTCACCGCCGTCCTCTTATTACTCTCCCTCCCTGTTTTAGCAGCAGGCATTACTATGCTACTCACAGACCGAAATCTTAATACCACTTTCTTTGACCCGGCAGGCGGAGGGGATCCAATCTTATACCAACACCTC
>org.aquagene|ZSM-PIS-031542|ZSM-BayFi 01081_CYB|Cytochrome-b|Salmo trutta
GAACCTAATGGCCAACCTCCGAAAAACTCACCCCCTCCTAAAAATTGCTAATGACGCACTAGTCGATCTCCCAGCACCATCTAACATCTCAGTTTGATGAAACTTTGGCTCACTCTTAGGCTTATGTCTAGCCACCCAAATTCTTACCGGACTCTTCCTAGCCATACACTACACCTCCGATATCTCAACAGCCTTTTCCTCTGTTTGCCACATTTGCCGAGATGTTAGCTACGGCTGACTCATCCGAAACATTCACGCTAACGGAGCATCTTTCTTCTTTATCTGTATTTATATACATATCGCCCGAGGACTCTACTATGGTTCCTACCTATATAAAGAAACCTGAAATATCGGAGTCGTACTGCTACTTCTCACTATAATAACCGCCTTCGTGGGCTACGTTCTTCCA

Sampling location: Iller river between "Illersprung" [Iller origin] and Reichenbach (4197) and Iller river upstream of Sonthofen (4218-19), Swabia, Bavaria State
Sampling country: Germany
Sampling latitude: 47.602 °
Sampling longitude: 10.425 °
Sampling date: 19-09-2005
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-033851|ZSM-BayFi 04197_16S|16S ribosomal RNA|Salmo trutta
AAGAGGTCCCGCCTGCCCTGTGACTATGGGTTTAACGGCCGCGGTATTTTGACCGTGCGAAGGTAGCGCAATCACTTGTCTTTTAAATGAAGACCTGTATGAATGGCATCACGAGGGCTTAGCTGTCTCCTCTTCCAAGTCAATGAAATTGATCTGCCCGTGCAGAAGCGGACATAAACACATAAGACGAGAAGACCCTATGGAGCTTTAGACACCAGGCAGATCACGTCAAGTAACCTTAAATTAACAGGTAAAAACACAGTGACCCCTAGCCCCTATGTCTTTGGTTGGGGCGACCGCGGGGGAAAACAAAGCCCCCATGTGGACTGGGGGCACTGCCCCCACAACCAAGAGCCACAACTCTAAGTACCAGAATTTCTGACCAAAAATGATCCGGCGAACGCCGATCAACGGACCGAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCCTATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-033851|ZSM-BayFi 04197_COI|Cytochrome c oxidase subunit I|Salmo trutta
TCTATTTAGTATTTGGTGCCTGAGCCGGGATAGTCGGCACCGCCCTAAGTCTCTTGATTCGGGCAGAACTCAGCCAACCCGGCGCCCTCCTAGGGGATGACCAGATTTATAACGTAATTGTTACAGCCCATGCCTTCGTAATAATTTTCTTTATAGTCATACCAATTATGATCGGCGGCTTTGGAAACTGATTAATCCCTCTCATAATCGGAGCCCCCGACATAGCATTCCCCCGAATGAATAACATAAGCTTCTGACTCCTCCCTCCGTCCTTTCTTCTCCTCCTAGCCTCGTCTGGAGTTGAAGCCGGCGCTGGCACAGGATGAACAGTCTACCCCCCTCTAGCCGGCAATCTTGCCCACGCAGGAGCTTCCGTTGACTTAACTATTTTCTCCCTCCATTTAGCTGGTATTTCCTCAATTTTGGGGGCCATTAATTTTATTACGACCATTATTAACATAAAACCCCCAGCCATCTCCCAATATCAAACTCCACTTTTTGTTTGGGCCGTGTTAGTCACCGCCGTCCTCTTATTACTCTCCCTCCCTGTTTTAGCAGCAGGCATTACTATGCTACTCACAGACCGAAATCTTAATACCAC
>org.aquagene|ZSM-PIS-033851|ZSM-BayFi 04197_CYB|Cytochrome-b|Salmo trutta
GAACCTAATGGCCAACCTCCGAAAAACTCACCCCCTCCTAAAAATTGCTAATGACGCACTAGTCGATCTCCCAGCACCATCTAACATCTCAGTTTGATGAAACTTTGGCTCACTCTTAGGCTTATGTCTAGCCACCCAAATTCTTACCGGACTCTTCCTAGCCATACACTACACCTCCGATATCTCAACAGCCTTTTCCTCTGTTTGCCACATTTGCCGAGATGTTAGCTACGGCTGACTCATCCGAAACATTCACGCTAACGGAGCATCTTTCTTCTTTATCTGTATTTATATACATATCGCCCGAGGACTCTACTATGGTTCCTACCTATATAAAGAAACCTGAAATATCGGAGTCGTACTGCTACTTCTCACTATAATAACCGCCTTCGTGGGCTACGTTCTTCCA

Sampling location: Kalte Moldau stream E of Haidmuehle
Sampling country: Germany
Sampling latitude: 48.831 °
Sampling longitude: 13.781 °
Sampling date: 06-07-2008
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-037450|ZSM-BayFi 07604_16S|16S ribosomal RNA|Salmo trutta
AAGAGGTCCCGCCTGCCCTGTGACTATGGGTTTAACGGCCGCGGTATTTTGACCGTGCGAAGGTAGCGCAATCACTTGTCTTTTAAATGAAGACCTGTATGAATGGCATCACGAGGGCTTAGCTGTCTCCTCTTCCAAGTCAATGAAATTGATCTGCCCGTGCAGAAGCGGACATAAACACATAAGACGAGAAGACCCTATGGAGCTTTAGACACCAGGCAGATCACGTCAAGTAACCTTAAATTAACAGGTAAAAACACAGTGACCCCTAGCCCCTATGTCTTTGGTTGGGGCGACCGCGGGGGAAAACAAAGCCCCCATGTGGACTGGGGGCACTGCCCCCACAACCAAGAGCCACAACTCTAAGTACCAGAATTTCTGACCAAAAATGATCCGGCGAACGCCGATCAACGGACCGAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCCTATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-037450|ZSM-BayFi 07604_COI|Cytochrome c oxidase subunit I|Salmo trutta
TATTTAGTATTTGGTGCCTGAGCCGGGATAGTCGGCACCGCCCTAAGTCTCTTGATTCGGGCAGAACTCAGCCAACCCGGCGCCCTCCTAGGGGATGACCAGATTTATAACGTAATTGTTACAGCCCATGCCTTCGTAATAATTTTCTTTATAGTCATACCAATTATGATCGGCGGCTTTGGAAACTGATTAATCCCTCTCATAATCGGAGCCCCCGACATAGCATTCCCCCGAATGAATAACATAAGCTTCTGACTCCTCCCTCCGTCCTTTCTTCTCCTCCTAGCCTCGTCTGGAGTTGAAGCCGGCGCTGGCACAGGATGAACAGTCTACCCCCCTCTAGCCGGCAATCTTGCCCACGCAGGAGCTTCCGTTGACTTAACTATTTTCTCCCTCCATTTAGCTGGTATTTCCTCAATTTTGGGGGCCATTAATTTTATTACGACCATTATTAACATAAAACCCCCAGCCATCTCCCAATATCAAACTCCACTTTTTGTTTGGGCCGTGTTAGTCACCGCCGTCCTCTTATTACTCTCCCTCCCTGTTTTAGCAGCAGGCATTACTATGCTACTCACAGACCGAAATCTTAATACCACTTTCTTTGACCCGGCAGGCGGAGGGGATCCAATCTTATACCAACACCTC
>org.aquagene|ZSM-PIS-037450|ZSM-BayFi 07604_CYB|Cytochrome-b|Salmo trutta
GAACCTAATGGCCAACCTCCGAAAAACTCACCCCCTCCTAAAAATTGCTAATGACGCACTAGTCGATCTCCCAGCACCATCTAACATCTCAGTTTGATGAAACTTTGGCTCACTCTTAGGCTTATGTCTAGCCACCCAAATTCTTACCGGACTCTTCCTAGCCATACACTACACCTCCGATATCTCAACAGCCTTTTCCTCTGTTTGCCACATTTGCCGAGATGTTAGCTACGGCTGACTCATCCGAAACATTCACGCTAACGGAGCATCTTTCTTCTTTATCTGTATTTATATACATATCGCCCGAGGACTCTACTATGGTTCCTACCTATATAAAGAAACCTGAAATATCGGAGTCGTACTGCTACTTCTCACTATAATAACCGCCTTCGTGGGCTACGTTCTTCCA

AquaGene

A genetic database collaboration developed by the Thünen Institute of Fisheries Ecology together with the Max Rubner-Institute - Department of Safety and Quality of Milk and Fish Products and Impetus Bioscience.

Funded by the German Federal Ministry of Food and Agriculture.

Sample collection performed by the Thünen Institute of Fisheries Ecology in cooperation with the University Mohammed V-Agdal (Morocco), the Instituto Nacional de Desenvolvimento das Pescas (Cape Verde), the National Agricultural Research Institute (The Gambia) and the EAF-Nansen Project.

Funded by the Moroccan Ministry of Higher Education, Scientific Research and Formation of Cadres and the German Federal Ministry of Education and Research.

Contact

Reinhold Hanel (portrait)
Reinhold Hanel portrait

// TODO: These are the details for the Reinhold Hanel portrait ...

Responsible for the content/editorial:
Prof. Dr. Reinhold Hanel

Johann Heinrich von Thünen Institute

Institute of Fisheries Ecology
Herwigstraße 31, 27572 Bremerhaven, Germany
Phone: +49 471 94460 200
Fax: +49 471 94460 199
Email: aquagene@thuenen.de

Headquarter
Johann Heinrich von Thünen Institute
Federal Research Institute for Rural Areas, Forestry and Fisheries
Bundesallee 50, 38116 Braunschweig, Germany
Phone: +49 531 596 1218
Fax: +49 531 596 1099
Email: info@thuenen.de

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