A video teaser

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AquaGene

The curated genetic reference database for fish species
Allowing an unambiguous determination of fisheries products
Do an alignment search against your sequence

Species: Scardinius erythrophthalmus

Family: Cyprinidae

BOLD data

Samples

Sampling location: Altmuehl stream at gauge in Thann, SE of Herrieden, Middle Franconia
Sampling country: Germany
Sampling latitude: 49.207 °
Sampling longitude: 10.544 °
Sampling date: 06-09-2004
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-031505|ZSM-BayFi 00814_16S|16S ribosomal RNA|Scardinius erythrophthalmus
CGCCTCCTGCAACTATATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAATTTAACCACGTTAAACGACTCTGTAGAAAGCAAGAACTTAGTGGCGAATGAAGTTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAAGAAGCCTCCGAGTGGAATGGGTTAAACCCCAAAGCTAAGAGATACATCTCTAAGCCGCAGGACATCTGACCAAAAATGATCCGACTGAtAAAGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-031505|ZSM-BayFi 00814_COI|Cytochrome c oxidase subunit I|Scardinius erythrophthalmus
TTTATCTTGTATTTGGTGCCTGGGCCGGAATAGTGGGGACTGCCTTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGATCAAATTTATAATGTCATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGAGGGTTTGGAAACTGACTCGTCCCACTAATGATTGGTGCACCTGATATAGCATTCCCACGGATAAATAATATGAGTTTCTGACTTCTCCCTCCGTCATTTCTGCTTCTACTAGCTTCTTCTGGTGTTGAAGCTGGGGCTGGAACAGGATGAACAGTATACCCACCACTCGCAGGTAATCTAGCCCACGCAGGAGCATCAGTAGACTTAACAATCTTCTCGCTCCACCTGGCAGGTGTATCATCAATTTTAGGCGCAGTTAACTTCATTACTACAATTATTAATATGAAGCCCCCAGCCATTTCCCAATATCAAACACCGCTGTTTGTATGAGCCGTACTGGTAACAGCTGTCCTTCTACTTCTATCACTACCAGTTCTAGCTGCCGGAATTACAATGCTTCTTACAGACCGTAATCTTAATACCACATTCTTCGACCCAGCGGGAGGAGGAGACCCAATCTTATATCAACACTTA
>org.aquagene|ZSM-PIS-031505|ZSM-BayFi 00814_CYB|Cytochrome-b|Scardinius erythrophthalmus
TGGCAAGCCTACGAAAAACCCACCCGCTAATTAAAATCGCTAATGACGCACTAGTCGACCTCCCAACACCCTCTAATATTTCAGCGCTATGAAACTTCGGATCCCTCCTAGGACTATGTCTAATTACTCAAATCCTAACAGGGCTGTTTCTAGCCATGCACTACACCTCTGACATCTCAACCGCATTTTCATCAGTAACCCATATTTGCCGAGACGTTAACTACGGCTGACTTATCCGAAGCCTACATGCCAACGGAGCATCCTTCTTCTTCATCTGTCTTTATATACATATCGCACGGGGACTATATTATGGGTCATACCTTTACAAAGAGACCTGAAATATTGGTGTAGTCCTATTTCTTTTGGTTATGATGACGGCCTTCGTCGGTTACGTACTTCCA

Sampling location: Vils dam upriver dam at Grafenmuehle, Lower Bavaria
Sampling country: Germany
Sampling latitude: 48.615 °
Sampling longitude: 13.165 °
Sampling date: 31-05-2005
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-033374|ZSM-BayFi 02831_16S|16S ribosomal RNA|Scardinius erythrophthalmus
CGCCTCCTGCAACTATATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAATTTAACCACGTTAAACGACTCTGTAGAAAGCAAGAACTTAGTGGCGAATGAAGTTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAAGAAGCCTCCGAGTGGAATGGGTTAAACCCCAAAGCTAAGAGATACATCTCTAAGCCGCAGGACATCTGACCAAAAATGATCCGACTGAtAAAGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-033374|ZSM-BayFi 02831_COI|Cytochrome c oxidase subunit I|Scardinius erythrophthalmus
TTTATCTTGTATTTGGTGCCTGGGCCGGAATAGTGGGGACTGCCTTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGATCAAATTTATAATGTCATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGAGGGTTTGGAAACTGACTCGTCCCACTAATGATTGGTGCACCTGATATAGCATTCCCACGGATAAATAATATGAGTTTCTGACTTCTCCCTCCGTCATTTCTGCTTCTACTAGCTTCTTCTGGTGTTGAAGCTGGGGCTGGAACAGGATGAACAGTATACCCACCACTCGCAGGTAATCTAGCCCACGCAGGAGCATCAGTAGACTTAACAATCTTCTCGCTCCACCTGGCAGGTGTATCATCAATTTTAGGCGCAGTTAACTTCATTACTACAATTATTAATATGAAGCCCCCAGCCATTTCCCAATATCAAACACCGCTGTTTGTATGAGCCGTACTGGTAACAGCTGTCCTTCTACTTCTATCACTACCAGTTCTAGCTGCCGGAATTACAATGCTTCTTACAGACCGTAATCTTAATACCACATTCTTCGACCCAGCGGGAGGAGGAGACCCAATCTTATATCAACACTTA
>org.aquagene|ZSM-PIS-033374|ZSM-BayFi 02831_CYB|Cytochrome-b|Scardinius erythrophthalmus
TGGCAAGCCTACGAAAAACCCACCCGCTAATTAAAATCGCTAATGACGCACTAGTCGACCTCCCAACACCCTCTAATATTTCAGCGCTATGAAACTTCGGATCCCTCCTAGGACTATGTCTAATTACTCAAATCCTAACAGGGCTGTTTCTAGCCATGCACTACACCTCTGACATCTCAACCGCATTTTCATCAGTAACCCATATTTGCCGAGACGTTAACTACGGCTGACTTATCCGAAGCCTACATGCCAACGGAGCATCCTTCTTCTTCATCTGTCTTTATATACATATCGCACGGGGACTATATTATGGGTCATACCTTTACAAAGAGACCTGAAATATTGGTGTAGTCCTATTTCTTTTGGTTATGATGACGGCCTTCGTCGGTTACGTACTTCCA

Sampling location: Fraenkische Saale river upstream of Graefendorf, N of Gemuenden, Lower Franconia
Sampling country: Germany
Sampling latitude: 50.119 °
Sampling longitude: 9.741 °
Sampling date: 19-09-2005
Voucher: SNSB/ZSM
FASTA sequences
>org.aquagene|ZSM-PIS-033786|ZSM-BayFi 03971_16S|16S ribosomal RNA|Scardinius erythrophthalmus
CGCCTCCTGCAACTATATTGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCTCTTAAATAGAGACCTGTATGAATGGCTAGACGAGGGCTTAACTGTCTCCCCCCTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTATACAAGACGAGAAGACCCTTTGGAGCTTAAGGTACAAAATTTAACCACGTTAAACGACTCTGTAGAAAGCAAGAACTTAGTGGCGAATGAAGTTTTACCTTCGGTTGGGGCGACCACGGAGGAGAAAGAAGCCTCCGAGTGGAATGGGTTAAACCCCAAAGCTAAGAGATACATCTCTAAGCCGCAGGACATCTGACCAAAAATGATCCGACTGAtAAAGCCGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCATATCGACGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCT
>org.aquagene|ZSM-PIS-033786|ZSM-BayFi 03971_COI|Cytochrome c oxidase subunit I|Scardinius erythrophthalmus
TTTATCTTGTATTTGGTGCCTGGGCCGGAATAGTGGGGACTGCCTTAAGCCTCCTTATTCGGGCCGAACTAAGCCAACCCGGGTCACTTTTAGGCGATGATCAAATTTATAATGTCATCGTTACCGCCCACGCCTTCGTAATAATTTTCTTTATAGTAATGCCAATTCTTATTGGAGGGTTTGGAAACTGACTCGTCCCACTAATGATTGGTGCACCTGATATAGCATTCCCACGGATAAATAATATGAGTTTCTGACTTCTCCCTCCGTCATTTCTGCTTCTACTAGCTTCTTCTGGTGTTGAAGCTGGGGCTGGAACAGGATGAACAGTATACCCACCACTCGCAGGTAATCTAGCCCACGCAGGAGCATCAGTAGACTTAACAATCTTCTCGCTCCACCTGGCAGGTGTATCATCAATTTTAGGCGCAGTTAACTTCATTACTACAATTATTAATATGAAGCCCCCAGCCATTTCCCAATATCAAACACCGCTGTTTGTATGAGCCGTACTGGTAACAGCTGTCCTTCTACTTCTATCACTACCAGTTCTAGCTGCCGGAATTACAATGCTTCTTACAGACCGTAATCTTAATACCACATTCTTCGACCCAGCGGGAGGAGGAGACCCAATCTTATATCAACACTTA
>org.aquagene|ZSM-PIS-033786|ZSM-BayFi 03971_CYB|Cytochrome-b|Scardinius erythrophthalmus
TGGCAAGCCTACGAAAAACCCACCCGCTAATTAAAATCGCTAATGACGCACTAGTCGACCTCCCAACACCCTCTAATATTTCAGCGCTATGAAACTTCGGATCCCTCCTAGGACTATGTCTAATTACTCAAATCCTAACAGGGCTGTTTCTAGCCATGCACTACACCTCTGACATCTCAACCGCATTTTCATCAGTAACCCATATTTGCCGAGACGTTAACTACGGCTGACTTATCCGAAGCCTACATGCCAACGGAGCATCCTTCTTCTTCATCTGTCTTTATATACATATCGCACGGGGACTATATTATGGGTCATACCTTTACAAAGAGACCTGAAATATTGGTGTAGTCCTATTTCTTTTGGTTATGATGACGGCCTTCGTCGGTTACGTACTTCCA

AquaGene

A genetic database collaboration developed by the Thünen Institute of Fisheries Ecology together with the Max Rubner-Institute - Department of Safety and Quality of Milk and Fish Products and Impetus Bioscience.

Funded by the German Federal Ministry of Food and Agriculture.

Sample collection performed by the Thünen Institute of Fisheries Ecology in cooperation with the University Mohammed V-Agdal (Morocco), the Instituto Nacional de Desenvolvimento das Pescas (Cape Verde), the National Agricultural Research Institute (The Gambia) and the EAF-Nansen Project.

Funded by the Moroccan Ministry of Higher Education, Scientific Research and Formation of Cadres and the German Federal Ministry of Education and Research.

Contact

Reinhold Hanel (portrait)
Reinhold Hanel portrait

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Responsible for the content/editorial:
Prof. Dr. Reinhold Hanel

Johann Heinrich von Thünen Institute

Institute of Fisheries Ecology
Herwigstraße 31, 27572 Bremerhaven, Germany
Phone: +49 471 94460 200
Fax: +49 471 94460 199
Email: aquagene@thuenen.de

Headquarter
Johann Heinrich von Thünen Institute
Federal Research Institute for Rural Areas, Forestry and Fisheries
Bundesallee 50, 38116 Braunschweig, Germany
Phone: +49 531 596 1218
Fax: +49 531 596 1099
Email: info@thuenen.de

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